Ligand · PYL
PYL · Pyrrolysine
PYL, Pyrrolysine (C12 H21 N3 O3, 255.3 g/mol), in the MolNFT structures on GenesisL1: bound in 4 records (2 PDB entries). Every binding site with its residues within 4.5 Å, the residues it binds most and the ligands found with it.
- Component
- PYL
- Formula
- C12 H21 N3 O3
- Class
- ligand
- Structures
- 4
- PDB entries
- 2
Binding sites
PYL in 4 structures; the first of them:
- 2ZCE · Crystal structure of the catalytic domain of pyrrolysyl-tRNA synthetase in complex with… · PYL A601 · binds MET300, ALA302, LEU305, TYR306, LEU309, ARG330, MET344, ASN346 and 8 more
- 4Q39 · PylD in complex with pyrrolysine and NADH · PYL A904 · binds ALA2, LEU3, LEU4, VAL51, PRO52, VAL53, GLY58, ILE59 and 9 more
- 2ZCE · Crystal structure of the catalytic domain of pyrrolysyl-tRNA synthetase in complex with… · PYL A601 · binds MET300, ALA302, LEU305, TYR306, LEU309, ARG330, MET344, ASN346 and 8 more
- 4Q39 · Pyld in complex with pyrrolysine and NADH · PYL A904 · binds ALA2, LEU3, LEU4, VAL51, PRO52, VAL53, GLY58, ILE59 and 9 more
Residues it binds most
LEU 6, ALA 6, PHE 6, VAL 6, ASP 4, GLY 6, ILE 4, PRO 4, ASN 6, MET 2 (residue and the binding sites it lines).
Found with
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