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Ligand · PY5

PY5 · 2-[O-phosphonopyridoxyl]-amino-pentanoic acid

PY5, 2-[O-phosphonopyridoxyl]-amino-pentanoic acid (C13 H21 N2 O7 P, 348.3 g/mol), in the MolNFT structures on GenesisL1: bound in 2 records (2 PDB entries). Every binding site with its residues within 4.5 Å, the residues it binds most and…

Component
PY5
Formula
C13 H21 N2 O7 P
Class
ligand
Structures
2
PDB entries
2

Binding sites

PY5 in 2 structures; the first of them:

  • 1CQ7 · Aspartate aminotransferase (E.C. 2.6.1.1) complexed with C5-pyridoxal-5P-phosphate · PY5 A413 · binds ILE17, LEU18, ILE37, GLY38, GLY107, GLY108, THR109, TRP140 and 12 more
  • 6THQ · Crystal structure of branched-chain aminotransferase from thermophilic archaea… · PY5 A302 · binds GLY33, HIS51, ARG54, TYR91, ARG93, ARG139, LYS150, TYR155 and 16 more

Residues it binds most

GLY 4, ARG 4, TYR 4, SER 4, ILE 4, THR 4, ALA 4, GLU 3, HIS 4, LEU 4 (residue and the binding sites it lines).

Found with

  • PLP · Pyridoxal-5'-phosphate

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