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Ligand · PVN

PVN · Phycoviolobilin

PVN, Phycoviolobilin (C33 H40 N4 O6, 588.7 g/mol), in the MolNFT structures on GenesisL1: bound in 5 records (3 PDB entries). Every binding site with its residues within 4.5 Å, the residues it binds most and the ligands found with it.

Component
PVN
Formula
C33 H40 N4 O6
Class
ligand
Structures
5
PDB entries
3

Binding sites

PVN in 5 structures; the first of them:

  • 2J96 · The E-configuration of alfa-Phycoerythrocyanin · PVN A1163 · binds VAL59, TYR60, THR66, PRO72, GLN73, TYR74, ALA75, GLY80 and 14 more
  • 2M7V · Green Light-Absorbing State of TePixJ, an Active Cyanobacteriochrome Domain · PVN A600 · binds ILE490, ASP492, CYS494, ARG496, GLU497, TRP499, GLN509, THR511 and 9 more
  • 5Y6P · Structure of the phycobilisome from the red alga Griffithsia pacifica · PVN A21004 · binds LEU117, TYR120, LYS121, ALA124, LYS133, CYS134, THR135, GLU136 and 12 more

Residues it binds most

TYR 40, ARG 38, ALA 40, SER 23, GLU 38, CYS 42, LEU 36, LYS 22, THR 20, VAL 27 (residue and the binding sites it lines).

Found with

  • CYC · Phycocyanobilin
  • PEB · Phycoerythrobilin
  • PUB · Phycourobilin

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