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Ligand · PRI

PRI · Pyrrolidine-2-carbaldehyde

PRI, Pyrrolidine-2-carbaldehyde (C5 H9 N O, 99.1 g/mol), in the MolNFT structures on GenesisL1: bound in 4 records (2 PDB entries). Every binding site with its residues within 4.5 Å, the residues it binds most and the ligands found with it.

Component
PRI
Formula
C5 H9 N O
Class
ligand
Structures
4
PDB entries
2

Binding sites

PRI in 4 structures; the first of them:

  • 1H4Q · Prolyl-tRNA synthetase from Thermus thermophilus complexed with tRNApro(CGG), ATP and… · PRI A1480 · binds THR111, GLU113, ARG142, TRP158, GLU160, HIS162, PHE205, THR228 and 4 more
  • 2J3M · PROLYL-TRNA SYNTHETASE FROM ENTEROCOCCUS FAECALIS COMPLEXED WITH ATP, manganese and… · PRI A1566 · binds THR109, GLU111, ARG140, MET157, ASP159, TYR161, HIS410, PHE412 and 3 more
  • 1H4Q · Prolyl-tRNA synthetase from thermus thermophilus complexed with TRNAPRO(CGG), ATP and… · PRI A1480 · binds THR111, GLU113, ARG142, TRP158, GLU160, HIS162, PHE205, THR228 and 4 more
  • 2J3M · Prolyl-tRNA synthetase from enterococcus faecalis complexed with ATP, manganese and… · PRI A1566 · binds THR109, GLU111, ARG140, MET157, ASP159, TYR161, HIS410, PHE412 and 3 more

Residues it binds most

GLU 8, HIS 8, THR 8, GLY 8, ARG 8, TRP 4, TYR 4, PHE 6, ASP 4, CYS 4 (residue and the binding sites it lines).

Found with

  • ATP · Adenosine-5'-triphosphate
  • MN · Manganese (II) ion
  • ZN · Zinc ion
  • SO4 · Sulfate ion

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