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Ligand · PNJ

PNJ · 4-nitrophenyl 2-amino-2-deoxy-beta-D-glucopyranoside

PNJ, 4-nitrophenyl 2-amino-2-deoxy-beta-D-glucopyranoside (C12 H16 N2 O7, 300.3 g/mol), in the MolNFT structures on GenesisL1: bound in 4 records (2 PDB entries). Every binding site with its residues within 4.5 Å, the residues it binds…

Component
PNJ
Formula
C12 H16 N2 O7
Class
sugar
Structures
4
PDB entries
2

Binding sites

PNJ in 4 structures; the first of them:

  • 2VZT · Complex of Amycolatopsis orientalis exo-chitosanase CsxA E541A with PNP-beta-D-glucosamine · PNJ A1901 · binds ILE202, ASP203, TRP204, GLU394, CYS419, SER468, ASP469, MET512 and 8 more
  • 2VZU · Complex of Amycolatopsis orientalis exo-chitosanase CsxA D469A with PNP-beta-D-glucosamine · PNJ A1901 · binds ILE202, ASP203, TRP204, GLU394, CYS419, CYS420, SER468, ALA469 and 7 more
  • 2VZT · Complex of amycolatopsis orientalis exo-chitosanase csxa E541A with pnp-beta-D-glucosamine · PNJ A1901 · binds ILE202, ASP203, TRP204, GLU394, CYS419, SER468, ASP469, MET512 and 8 more
  • 2VZU · Complex of amycolatopsis orientalis exo-chitosanase csxa D469A with pnp-beta-D-glucosamine · PNJ A1901 · binds ILE202, ASP203, TRP204, GLU394, CYS419, CYS420, SER468, ALA469 and 7 more

Residues it binds most

TRP 8, ASP 8, CYS 8, GLU 8, MET 8, ILE 8, PHE 8, SER 8, TYR 8, ALA 4 (residue and the binding sites it lines).

Found with

  • CD · Cadmium ion
  • ACT · Acetate ion

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