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Ligand · PK9

PK9 · tert-butyl {6-oxo-6-[(pyridin-3-ylmethyl)amino]hexyl}carbamate

PK9, tert-butyl {6-oxo-6-[(pyridin-3-ylmethyl)amino]hexyl}carbamate (C17 H27 N3 O3, 321.4 g/mol), in the MolNFT structures on GenesisL1: bound in 4 records (2 PDB entries). Every binding site with its residues within 4.5 Å, the residues it…

Component
PK9
Formula
C17 H27 N3 O3
Class
ligand
Structures
4
PDB entries
2

Binding sites

PK9 in 4 structures; the first of them:

  • 4D6Z · Cytochrome P450 3A4 bound to imidazole and an inhibitor · PK9 A1600 · binds ARG105, PHE108, SER119, ILE120, ARG212, PHE213, PHE215, ILE301 and 5 more
  • 4D75 · Cytochrome P450 3A4 bound to an inhibitor · PK9 A600 · binds ARG105, SER119, ILE120, ARG212, PHE215, ILE301, PHE304, ALA305 and 4 more
  • 4D6Z · Cytochrome P450 3A4 bound to imidazole and an inhibitor · PK9 A1600 · binds ARG105, PHE108, SER119, ILE120, ARG212, PHE213, PHE215, ILE301 and 5 more
  • 4D75 · Cytochrome P450 3A4 bound to an inhibitor · PK9 A600 · binds ARG105, SER119, ILE120, ARG212, PHE215, ILE301, PHE304, ALA305 and 4 more

Residues it binds most

ILE 4, PHE 4, ALA 4, ARG 4, SER 4, THR 4, LEU 2 (residue and the binding sites it lines).

Found with

  • HEM · Protoporphyrin IX containing Fe
  • GOL · Glycerol
  • IMD · Imidazole

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