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Ligand · PE6

PE6 · Phosphoryl-hexaethylene glycol

PE6, Phosphoryl-hexaethylene glycol (C12 H27 O10 P, 362.3 g/mol), in the MolNFT structures on GenesisL1: bound in 6 records (4 PDB entries). Every binding site with its residues within 4.5 Å, the residues it binds most and the ligands…

Component
PE6
Formula
C12 H27 O10 P
Class
ligand
Structures
6
PDB entries
4

Binding sites

PE6 in 6 structures; the first of them:

  • 1G1N · Nicked decamer DNA with PEG6 tether, NMR, 30 structures · PE6 C11 · binds DG1, DC10
  • 4ETJ · Crystal Structure of E6H variant of de novo designed serine hydrolase OSH55, Northeast… · PE6 A204 · binds ILE4, HIS6, PHE110, THR111, ALA112, ALA115, TRP116, LEU126 and 7 more
  • 1G1N · Nicked decamer DNA with PEG6 tether, NMR, 30 structures · PE6 C11 · binds DG1, DC10
  • 4ETJ · Crystal structure of E6H variant of de novo designed serine hydrolase OSH55, northeast… · PE6 A204 · binds ILE4, HIS6, PHE110, THR111, ALA112, ALA115, TRP116, LEU126 and 7 more
  • 4HQU · Crystal structure of human PDGF-bb in complex with a modified nucleotide aptamer (somamer… · PE6 C5 · binds DC4, DG6
  • 4HQX · Crystal structure of human PDGF-bb in complex with a modified nucleotide aptamer (somamer… · PE6 C5 · binds DC4, DG6

Residues it binds most

DC 6, DG 6, LEU 2, ALA 2, HIS 2, ILE 2, GLY 2, MET 2, PHE 2, THR 2 (residue and the binding sites it lines).

Found with

  • MG · Magnesium ion
  • NA · Sodium ion
  • CL · Chloride ion
  • PE4 · 2-{2-[2-(2-{2-[2-(2-ethoxy-ethoxy)-ethoxy]-ethoxy}-ethoxy)-ethoxy]-ethoxy}-ethanol
  • PE5 · 3,6,9,12,15,18,21,24-octaoxahexacosan-1-ol

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