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Ligand · PDE

PDE · Para-nitrophenyl phosphonobutanoyl D-alanine

PDE, Para-nitrophenyl phosphonobutanoyl D-alanine (C13 H17 N2 O8 P, 360.3 g/mol), in the MolNFT structures on GenesisL1: bound in 2 records (1 PDB entry). Every binding site with its residues within 4.5 Å, the residues it binds most and…

Component
PDE
Formula
C13 H17 N2 O8 P
Class
ligand
Structures
2
PDB entries
1

Binding sites

PDE in 2 structures; the first of them:

  • 1KN4 · Catalytic antibody D2.3 complex · PDE L551 · binds TYR32, ASN34, VAL89, GLN90, GLY91, HIS93, PHE94, TYR96 and 9 more
  • 1KN4 · Catalytic antibody D2.3 complex · PDE L551 · binds TYR32, ASN34, VAL89, GLN90, GLY91, HIS93, PHE94, TYR96 and 9 more

Residues it binds most

PHE 2, TYR 2, HIS 2, TRP 2, VAL 2, ARG 2, ASN 2, GLN 2, GLY 2, THR 2 (residue and the binding sites it lines).

Found with

  • ZN · Zinc ion

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