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Ligand · PB6

PB6 · 3-[(1E)-but-1-en-1-yl]-1-(2,2-diphosphonoethyl)pyridinium

PB6, 3-[(1E)-but-1-en-1-yl]-1-(2,2-diphosphonoethyl)pyridinium (C11 H18 N O6 P2 +1, 322.2 g/mol), in the MolNFT structures on GenesisL1: bound in 2 records (1 PDB entry). Every binding site with its residues within 4.5 Å, the residues it…

Component
PB6
Formula
C11 H18 N O6 P2 +1
Class
ligand
Structures
2
PDB entries
1

Binding sites

PB6 in 2 structures; the first of them:

  • 3ICZ · Trypanosoma cruzi farnesyl diphosphate synthase homodimer in complex with… · PB6 A363 · binds TYR94, LEU95, GLU97, ASP98, ASP99, MET101, ASP102, ARG107 and 10 more
  • 3ICZ · Trypanosoma cruzi farnesyl diphosphate synthase homodimer in complex with… · PB6 A363 · binds TYR94, LEU95, GLU97, ASP98, ASP99, MET101, ASP102, ARG107 and 10 more

Residues it binds most

ASP 2, GLN 2, LYS 2, THR 2, TYR 2, ARG 2, GLU 2, LEU 2, MET 2 (residue and the binding sites it lines).

Found with

  • IPE · 3-methylbut-3-enyl trihydrogen diphosphate
  • MG · Magnesium ion

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