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Ligand · P8F

P8F · Pentacycline

P8F, Pentacycline (C29 H30 F N3 O7, 551.6 g/mol), in the MolNFT structures on GenesisL1: bound in 2 records (2 PDB entries). Every binding site with its residues within 4.5 Å, the residues it binds most and the ligands found with it.

Component
P8F
Formula
C29 H30 F N3 O7
Class
ligand
Structures
2
PDB entries
2

Binding sites

P8F in 2 structures; the first of them:

  • 8CGI · Pentacycline TP038 bound to the 30S head · P8F A1601 · binds U965, 2MG966, G1053, C1054, C1195, A1196, A1197, G1198
  • 8CGV · Tiamulin bound to the 50S subunit · P8F a3001 · binds G1025, G1026, A1027, A1028, A1126, A1134, C1135, G1136 and 2 more

Residues it binds most

A 3, G 2, C 3, U 2, 2MG 1 (residue and the binding sites it lines).

Found with

  • K · Potassium ion
  • MG · Magnesium ion
  • MUL · Tiamulin
  • ZN · Zinc ion

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