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Ligand · P8D

P8D · phosphinate pseudodipeptide L-Ala-D-Asp

P8D, phosphinate pseudodipeptide L-Ala-D-Asp (C7 H14 N O6 P, 239.2 g/mol), in the MolNFT structures on GenesisL1: bound in 2 records (1 PDB entry). Every binding site with its residues within 4.5 Å, the residues it binds most and the…

Component
P8D
Formula
C7 H14 N O6 P
Class
ligand
Structures
2
PDB entries
1

Binding sites

P8D in 2 structures; the first of them:

  • 3K5X · Crystal structure of dipeptidase from Streptomics coelicolor complexed with phosphinate… · P8D A401 · binds HIS20, ASP22, TYR68, GLU123, HIS150, ASN151, HIS191, HIS212 and 8 more
  • 3K5X · Crystal structure of dipeptidase from streptomics coelicolor complexed with phosphinate… · P8D A401 · binds HIS20, ASP22, TYR68, GLU123, HIS150, ASN151, HIS191, HIS212 and 8 more

Residues it binds most

HIS 2, ASP 2, ARG 2, ASN 2, GLU 2, GLY 2, LYS 2, PHE 2, PRO 2, THR 2 (residue and the binding sites it lines).

Found with

  • ZN · Zinc ion

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