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Ligand · P5Y

P5Y · N-[(1-benzyl-1H-tetrazol-5-yl)methyl]-N-{[4-(hydroxycarbamoyl)phenyl]methyl}-2-(trifluoromethyl) benzamide

P5Y, N-[(1-benzyl-1H-tetrazol-5-yl)methyl]-N-{[4-(hydroxycarbamoyl)phenyl]methyl}-2-(trifluoromethyl) benzamide (C25 H21 F3 N6 O3, 510.5 g/mol), in the MolNFT structures on GenesisL1: bound in 2 records (1 PDB entry). Every binding site…

Component
P5Y
Formula
C25 H21 F3 N6 O3
Class
ligand
Structures
2
PDB entries
1

Binding sites

P5Y in 2 structures; the first of them:

  • 6PYE · Crystal structure of Danio rerio histone deacetylase 6 catalytic domain 2 complexed with… · P5Y A801 · binds HIS463, PRO464, SER531, HIS573, HIS574, GLY582, PHE583, ASP612 and 7 more
  • 6PYE · Crystal structure of danio rerio histone deacetylase 6 catalytic domain 2 complexed with… · P5Y A801 · binds HIS463, PRO464, SER531, HIS573, HIS574, GLY582, PHE583, ASP612 and 6 more

Residues it binds most

HIS 4, ASP 4, PHE 4, GLY 4, ASN 4, LEU 4, PRO 4, SER 4, TYR 4, ALA 2 (residue and the binding sites it lines).

Found with

  • K · Potassium ion
  • ZN · Zinc ion
  • EDO · 1,2-ethanediol

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