Ligand · P5E
P5E · [[(2~{R},3~{S},4~{R},5~{R})-5-[2,4-bis(oxidanylidene) pyrimidin-1-yl]-3,4-bis(oxidanyl)oxolan-2-yl]methoxy-sulfanyl-phosphoryl] phosphono hydrogen phosphate
P5E, [[(2~{R},3~{S},4~{R},5~{R})-5-[2,4-bis(oxidanylidene) pyrimidin-1-yl]-3,4-bis(oxidanyl)oxolan-2-yl]methoxy-sulfanyl-phosphoryl] phosphono hydrogen phosphate (C9 H15 N2 O14 P3 S, 500.2 g/mol), in the MolNFT structures on GenesisL1…
- Component
- P5E
- Formula
- C9 H15 N2 O14 P3 S
- Class
- ligand
- Structures
- 3
- PDB entries
- 2
Binding sites
P5E in 3 structures; the first of them:
- 6YMW · Cryo-EM structure of yeast mitochondrial RNA polymerase transcription initiation complex · P5E A1401 · binds ARG829, GLY946, THR947, CYS948, ASN949, GLY950, TYR979, ARG1010 and 11 more
- 8OPP · Structure of human terminal uridylyltransferase 7 (hTUT7/ZCCHC6) bound with pre-let7g… · P5E A1501 · binds PHE1045, GLY1046, SER1047, SER1057, ASP1058, LEU1059, ASP1060, ASP1119 and 11 more
- 6YMW · Cryo-EM structure of yeast mitochondrial RNA polymerase transcription initiation complex · P5E A1401 · binds ARG829, GLY946, THR947, CYS948, ASN949, TYR979, ARG1010, LYS1014 and 8 more
Residues it binds most
ASP 3, TYR 3, ARG 2, GLY 3, LYS 3, SER 1, THR 3, ASN 3, HIS 3, CYS 2 (residue and the binding sites it lines).
Found with
- MG · Magnesium ion
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