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Ligand · P5D

P5D · (2R)-2-{[(S)-[(1R)-1-amino-2-phenylethyl](hydroxy)phosphoryl]methyl}butanedioic acid

P5D, (2R)-2-{[(S)-[(1R)-1-amino-2-phenylethyl](hydroxy)phosphoryl]methyl}butanedioic acid (C13 H18 N O6 P, 315.3 g/mol), in the MolNFT structures on GenesisL1: bound in 2 records (1 PDB entry). Every binding site with its residues within…

Component
P5D
Formula
C13 H18 N O6 P
Class
ligand
Structures
2
PDB entries
1

Binding sites

P5D in 2 structures; the first of them:

  • 3S2M · Crystal structure of dipeptidase from Streptomyces coelicolor complexed with phosphinate… · P5D A401 · binds HIS20, ASP22, TRP25, TYR68, GLU123, HIS150, ASN151, HIS191 and 9 more
  • 3S2M · Crystal structure of dipeptidase from streptomyces coelicolor complexed with phosphinate… · P5D A401 · binds HIS20, ASP22, TRP25, TYR68, GLU123, HIS150, ASN151, HIS191 and 9 more

Residues it binds most

HIS 2, ASP 2, ARG 2, ASN 2, GLU 2, GLY 2, LYS 2, PHE 2, PRO 2, THR 2 (residue and the binding sites it lines).

Found with

  • ZN · Zinc ion
  • EDO · 1,2-ethanediol

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