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Ligand · P3D

P3D · (4-{(E)-[(5-aminopentyl)imino]methyl}-5-hydroxy-6-methylpyridin-3-yl)methyl dihydrogen phosphate

P3D, (4-{(E)-[(5-aminopentyl)imino]methyl}-5-hydroxy-6-methylpyridin-3-yl)methyl dihydrogen phosphate (C13 H22 N3 O5 P, 331.3 g/mol), in the MolNFT structures on GenesisL1: bound in 2 records (1 PDB entry). Every binding site with its…

Component
P3D
Formula
C13 H22 N3 O5 P
Class
ligand
Structures
2
PDB entries
1

Binding sites

P3D in 2 structures; the first of them:

  • 2PLK · Crystal structure of lysine/ornithine decarboxylase complexed with cadaverine from Vibrio… · P3D A501 · binds ALA64, LYS66, PRO67, ASP85, THR108, ARG151, HIS194, SER197 and 15 more
  • 2PLK · Crystal structure of LYSINE/ORNITHINE decarboxylase complexed with cadaverine from vibrio… · P3D A501 · binds ALA64, LYS66, PRO67, ASP85, THR108, ARG151, HIS194, SER197 and 15 more

Residues it binds most

ASP 4, GLY 4, ARG 4, PHE 4, PRO 4, TYR 4, ALA 4, CYS 4, GLN 4, GLU 4 (residue and the binding sites it lines).

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