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Ligand · P2M

P2M · N-(pyridin-2-ylmethyl)naphthalene-1-sulfonamide

P2M, N-(pyridin-2-ylmethyl)naphthalene-1-sulfonamide (C16 H14 N2 O2 S, 298.4 g/mol), in the MolNFT structures on GenesisL1: bound in 4 records (2 PDB entries). Every binding site with its residues within 4.5 Å, the residues it binds most…

Component
P2M
Formula
C16 H14 N2 O2 S
Class
ligand
Structures
4
PDB entries
2

Binding sites

P2M in 4 structures; the first of them:

  • 3NJ1 · X-ray crystal structure of the PYL2(V114I)-pyrabactin A complex · P2M A301 · binds LYS64, HIS65, PHE66, VAL67, VAL85, VAL87, SER89, SER96 and 11 more
  • 3NJO · X-ray crystal structure of the Pyr1-pyrabactin A complex · P2M B300 · binds LYS59, PHE61, ILE62, VAL81, VAL83, LEU87, ALA89, SER92 and 9 more
  • 3NJ1 · X-ray crystal structure of the PYL2(V114I)-pyrabactin a complex · P2M A301 · binds LYS64, HIS65, PHE66, VAL67, VAL85, VAL87, SER89, SER96 and 11 more
  • 3NJO · X-ray crystal structure of the PYR1-pyrabactin a complex · P2M B300 · binds LYS59, PHE61, ILE62, VAL81, VAL83, LEU87, ALA89, SER92 and 9 more

Residues it binds most

VAL 4, PHE 4, ILE 4, LEU 4, SER 4, ALA 2, GLU 4, HIS 2, LYS 4, TYR 4 (residue and the binding sites it lines).

Found with

  • PYV · 4-bromo-N-(pyridin-2-ylmethyl)naphthalene-1-sulfonamide
  • NA · Sodium ion
  • CL · Chloride ion
  • SO4 · Sulfate ion
  • GOL · Glycerol

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