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Ligand · OZY

OZY · (1R,2R,3S,4R,6S)-4,6-diamino-2-[(3-O-{2-amino-2,6-dideoxy-6-[({3-hydroxy-2-methyl-5-[(phosphonooxy) methyl]pyridin-4-yl}methyl)amino]-alpha-D-glucopyranosyl}-beta-D-ribofuranosyl)oxy]-3-hydroxycyclohexyl 2,6-diamino-2,6-dideoxy-alpha-D-glucopyranoside

OZY, (1R,2R,3S,4R,6S)-4,6-diamino-2-[(3-O-{2-amino-2,6-dideoxy-6-[({3-hydroxy-2-methyl-5-[(phosphonooxy) methyl]pyridin-4-yl}methyl)amino]-alpha-D-glucopyranosyl}-beta-D-ribofuranosyl)oxy]-3-hydroxycyclohexyl…

Component
OZY
Formula
C31 H56 N7 O18 P
Class
ligand
Structures
2
PDB entries
2

Binding sites

OZY in 2 structures; the first of them:

  • 6CBM · X-ray structure of neob from streptomyces fradiae in complex with plp and neomycin (as… · OZY A501 · binds THR13, ARG48, SER103, GLY104, THR105, TYR129, HIS130, GLY131 and 16 more
  • 6CBN · X-ray structure of neob from streptomyces fradiae in complex with plp and neomycin (as… · OZY A501 · binds THR13, ARG48, SER103, GLY104, THR105, TYR129, HIS130, GLY131 and 16 more

Residues it binds most

ASP 4, LYS 4, THR 4, SER 4, ASN 4, GLY 4, TYR 4, VAL 4, PHE 4, ARG 4 (residue and the binding sites it lines).

Found with

  • EDO · 1,2-ethanediol
  • CL · Chloride ion

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