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Ligand · OPD

OPD · 9R,13R-12-oxophytodienoic acid

OPD, 9R,13R-12-oxophytodienoic acid (C18 H28 O3, 292.4 g/mol), in the MolNFT structures on GenesisL1: bound in 2 records (1 PDB entry). Every binding site with its residues within 4.5 Å, the residues it binds most and the ligands found…

Component
OPD
Formula
C18 H28 O3
Class
ligand
Structures
2
PDB entries
1

Binding sites

OPD in 2 structures; the first of them:

  • 1ICQ · Crystal structure of 12-oxophytodienoate reductase 1 from tomato complexed with… · OPD A503 · binds THR37, GLN39, ALA68, TYR78, TRP112, MET142, SER143, HIS187 and 4 more
  • 1ICQ · Crystal structure of 12-oxophytodienoate reductase 1 from tomato complexed with… · OPD A503 · binds THR37, GLN39, ALA68, TYR78, TRP112, MET142, SER143, HIS187 and 4 more

Residues it binds most

TYR 4, HIS 4, ALA 4, GLN 4, MET 4, SER 4, THR 4, TRP 4 (residue and the binding sites it lines).

Found with

  • FMN · Flavin mononucleotide

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