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Ligand · OOB

OOB · 5'-O-[(R)-(benzoyloxy)(hydroxy)phosphoryl]adenosine

OOB, 5'-O-[(R)-(benzoyloxy)(hydroxy)phosphoryl]adenosine (C17 H18 N5 O8 P, 451.3 g/mol), in the MolNFT structures on GenesisL1: bound in 2 records (2 PDB entries). Every binding site with its residues within 4.5 Å, the residues it binds…

Component
OOB
Formula
C17 H18 N5 O8 P
Class
ligand
Structures
2
PDB entries
2

Binding sites

OOB in 2 structures; the first of them:

  • 4ZJZ · Crystal structure of a benzoate coenzyme A ligase with Benzoyl-AMP · OOB A1000 · binds SER181, ALA227, TYR228, ALA302, GLY303, GLU304, ALA305, ASP324 and 17 more
  • 5WM6 · Crystal structure of cahj in complex with benzoyl adenylate · OOB A601 · binds HIS255, ASN256, PHE257, CYS261, GLY327, GLY328, SER329, LYS330 and 11 more

Residues it binds most

GLY 3, TYR 2, ALA 3, SER 3, ASP 3, LYS 3, GLU 2, ILE 2, THR 2, HIS 3 (residue and the binding sites it lines).

Found with

  • BEZ · Benzoic acid
  • MG · Magnesium ion
  • ACT · Acetate ion
  • GOL · Glycerol

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