GL1X · GenesisL1 explorer

Ligand · O8M

O8M · 2-[{[(2R,3S,4R,5R)-5-(6-amino-8-methyl-9H-purin-9-yl)-3,4-dihydroxytetrahydrofuran-2-yl]methyl}(methyl)amino]acetamide

O8M, 2-[{[(2R,3S,4R,5R)-5-(6-amino-8-methyl-9H-purin-9-yl)-3,4-dihydroxytetrahydrofuran-2-yl]methyl}(methyl)amino]acetamide (C14 H21 N7 O4, 351.4 g/mol), in the MolNFT structures on GenesisL1: bound in 2 records (1 PDB entry). Every…

Component
O8M
Formula
C14 H21 N7 O4
Class
ligand
Structures
2
PDB entries
1

Binding sites

O8M in 2 structures; the first of them:

  • 3DZ7 · Human AdoMetDC with 5'-[(carboxamidomethyl)methylamino]-5'-deoxy-8-methyladenosine · O8M A368 · binds HIS5, PHE7, GLY9, SER66, GLU67, PYR68, CYS82, PHE223 and 11 more
  • 3DZ7 · Human adometdc with 5'-[(CARBOXAMIDOMETHYL)METHYLAMINO]-5'-deoxy-8- methyladenosine · O8M A368 · binds HIS5, PHE7, GLY9, SER66, GLU67, CYS82, PHE223, ASN224 and 10 more

Residues it binds most

CYS 2, GLU 2, GLY 2, HIS 2, PHE 2, PRO 2, SER 2, ASN 2, ILE 2, THR 2 (residue and the binding sites it lines).

Found with

  • PUT · 1,4-diaminobutane
  • PYR · Pyruvic acid

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