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Ligand · O35

O35 · ~{N}-[3-[(dimethylamino)methyl]-5-methyl-phenyl]-2-[3-methoxy-5-(7-methoxyquinolin-4-yl)oxy-pyridin-2-yl]ethanamide

O35, ~{N}-[3-[(dimethylamino)methyl]-5-methyl-phenyl]-2-[3-methoxy-5-(7-methoxyquinolin-4-yl)oxy-pyridin-2-yl]ethanamide (C28 H30 N4 O4, 486.6 g/mol), in the MolNFT structures on GenesisL1: bound in 3 records (2 PDB entries). Every binding…

Component
O35
Formula
C28 H30 N4 O4
Class
ligand
Structures
3
PDB entries
2

Binding sites

O35 in 3 structures; the first of them:

  • 6XV9 · Crystal structure of the kinase domain of human c-KIT in complex with a type-II inhibitor · O35 A1001 · binds TYR568, LEU595, VAL603, ALA621, VAL622, LYS623, GLU640, VAL643 and 19 more
  • 6XV9 · Crystal structure of the kinase domain of human C-kit in complex with a type-II inhibitor · O35 A1001 · binds LEU595, VAL603, ALA621, VAL622, LYS623, GLU640, VAL643, LEU644 and 14 more
  • 6XVJ · Crystal structure of the kdr (VEGFR2) kinase domain in complex with a type-II inhibitor · O35 A1201 · binds LEU840, VAL848, ALA866, VAL867, LYS868, GLU885, ILE888, LEU889 and 16 more

Residues it binds most

VAL 5, LEU 5, CYS 5, ILE 5, GLU 5, LYS 5, PHE 5, ALA 5, ASP 5, GLY 5 (residue and the binding sites it lines).

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