GL1X · GenesisL1 explorer

Ligand · NYM

NYM · 3'-deoxy-3'-aminothymidine monophosphate

NYM, 3'-deoxy-3'-aminothymidine monophosphate (C10 H16 N3 O7 P, 321.2 g/mol), in the MolNFT structures on GenesisL1: bound in 3 records (2 PDB entries). Every binding site with its residues within 4.5 Å, the residues it binds most and the…

Component
NYM
Formula
C10 H16 N3 O7 P
Class
ligand
Structures
3
PDB entries
2

Binding sites

NYM in 3 structures; the first of them:

  • 1NMZ · Crystal structure of human thymidylate kinase with NH2TMP and AppNHp · NYM A301 · binds ASP15, PHE42, PRO43, ARG45, LEU57, PHE72, ARG76, ARG97 and 7 more
  • 1NMZ · Crystal structure of human thymidylate kinase with NH2TMP and appnhp · NYM A301 · binds ASP15, PHE42, PRO43, ARG45, LEU57, PHE72, ARG76, ARG97 and 7 more
  • 363D · High-resolution crystal structure of a fully modified N3'-> P5' phosphoramidate DNA… · NYM A7

Residues it binds most

ARG 2, PHE 2, TYR 2, ASP 2, GLU 2, GLY 2, LEU 2, PRO 2, SER 2 (residue and the binding sites it lines).

Found with

  • ANP · Phosphoaminophosphonic acid-adenylate ester
  • MG · Magnesium ion
  • A43 · 3'-amino deoxyadenosine 5'-monophosphate
  • C42 · 3'-amino-2'-deoxy-cytidine-5'-monophosphate
  • G38 · 3'-amino-2'-deoxy-guanosine-5'-monophosphate
  • CL · Chloride ion
  • NH4 · Ammonium ion

GL1X is a live explorer of the GenesisL1 blockchain. Turn on JavaScript for search, charts and interactive views.