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Ligand · NVG

NVG · 4-amino-1-(5-{[3-(1H-benzimidazol-2-yl)propanoyl]amino}-5-deoxy-alpha-L-lyxofuranosyl)pyrimidin-2(1H)-one

NVG, 4-amino-1-(5-{[3-(1H-benzimidazol-2-yl)propanoyl]amino}-5-deoxy-alpha-L-lyxofuranosyl)pyrimidin-2(1H)-one (C19 H22 N6 O5, 414.4 g/mol), in the MolNFT structures on GenesisL1: bound in 2 records (1 PDB entry). Every binding site with…

Component
NVG
Formula
C19 H22 N6 O5
Class
ligand
Structures
2
PDB entries
1

Binding sites

NVG in 2 structures; the first of them:

  • 2V2Q · IspE in complex with ligand · NVG A1274 · binds GLY23, TYR24, HIS25, ILE27, LYS145, SER168, SER169, SER170 and 3 more
  • 2V2Q · Ispe in complex with ligand · NVG A1274 · binds GLY23, TYR24, HIS25, ILE27, LYS145, SER168, SER169, SER170 and 3 more

Residues it binds most

GLY 4, SER 4, TYR 4, ILE 4, HIS 4, LYS 4, THR 4, ALA 2 (residue and the binding sites it lines).

Found with

  • BR · Bromide ion
  • SO4 · Sulfate ion
  • GOL · Glycerol

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