GL1X · GenesisL1 explorer

Ligand · NSD

NSD · N-(3-aminopropyl)propane-1,3-diamine

NSD, N-(3-aminopropyl)propane-1,3-diamine (C6 H17 N3, 131.2 g/mol), in the MolNFT structures on GenesisL1: bound in 3 records (2 PDB entries). Every binding site with its residues within 4.5 Å, the residues it binds most and the ligands…

Component
NSD
Formula
C6 H17 N3
Class
ligand
Structures
3
PDB entries
2

Binding sites

NSD in 3 structures; the first of them:

  • 3N29 · Crystal structure of carboxynorspermidine decarboxylase complexed with Norspermidine from… · NSD A1002 · binds LYS41, CYS169, GLU170, GLU236, ASP272, TYR342, LYS346, LEU314 and 1 more
  • 7XJN · Structure of VcPotD1 in complex with norspermidine · NSD A401 · binds TRP32, SER33, GLU34, TYR35, SER80, TYR82, ASP165, GLU168 and 5 more
  • 3N29 · Crystal structure of carboxynorspermidine decarboxylase complexed with norspermidine from… · NSD A1002 · binds LYS41, CYS169, GLU170, GLU236, ASP272, TYR342, LYS346, LEU314 and 1 more

Residues it binds most

TYR 6, GLU 6, TRP 4, ASP 6, SER 4, GLN 4, LYS 2, CYS 2, LEU 2, PHE 2 (residue and the binding sites it lines).

Found with

  • PLP · Pyridoxal-5'-phosphate
  • GOL · Glycerol
  • P6G · Hexaethylene glycol
  • PG4 · Tetraethylene glycol

GL1X is a live explorer of the GenesisL1 blockchain. Turn on JavaScript for search, charts and interactive views.