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Ligand · NPK

NPK · 5-[(3aS,4R,6aR)-1-{[(1R)-1-(6-nitro-1,3-benzodioxol-5-yl)ethoxy]carbonyl}-2-oxohexahydro-1H-thieno[3,4-d]imidazol-4-yl]pentanoic acid

NPK, 5-[(3aS,4R,6aR)-1-{[(1R)-1-(6-nitro-1,3-benzodioxol-5-yl)ethoxy]carbonyl}-2-oxohexahydro-1H-thieno[3,4-d]imidazol-4-yl]pentanoic acid (C20 H23 N3 O9 S, 481.5 g/mol), in the MolNFT structures on GenesisL1: bound in 2 records (1 PDB…

Component
NPK
Formula
C20 H23 N3 O9 S
Class
ligand
Structures
2
PDB entries
1

Binding sites

NPK in 2 structures; the first of them:

  • 3VHM · Crystal structure of NPC-biotin-avidin complex · NPK A1124 · binds ASN12, ASP13, LEU14, SER16, TYR33, THR35, VAL37, THR38 and 15 more
  • 3VHM · Crystal structure of npc-biotin-avidin complex · NPK A1124 · binds ASN12, ASP13, LEU14, SER16, TYR33, THR35, VAL37, THR38 and 15 more

Residues it binds most

THR 8, SER 8, TRP 8, ASN 8, ILE 8, LEU 8, PHE 8, ALA 8, ASP 8, TYR 8 (residue and the binding sites it lines).

Found with

  • NAG · 2-acetamido-2-deoxy-beta-D-glucopyranose
  • SO4 · Sulfate ion

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