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Ligand · NPF

NPF · 2-nitrophenyl beta-D-fucopyranoside

NPF, 2-nitrophenyl beta-D-fucopyranoside (C12 H15 N O7, 285.2 g/mol), in the MolNFT structures on GenesisL1: bound in 6 records (3 PDB entries). Every binding site with its residues within 4.5 Å, the residues it binds most and the ligands…

Component
NPF
Formula
C12 H15 N O7
Class
sugar
Structures
6
PDB entries
3

Binding sites

NPF in 6 structures; the first of them:

  • 1EFA · Crystal structure of the lac repressor dimer bound to operator and the anti-inducer onpf · NPF A901 · binds LEU73, HIS74, ALA75, PRO76, ILE79, ASN125, LEU148, ASP149 and 11 more
  • 1JWL · Structure of the Dimeric lac Repressor/Operator O1/ONPF Complex · NPF A334 · binds LEU73, ALA75, PRO76, ILE79, ASN125, LEU148, ASP149, PHE161 and 10 more
  • 2PAF · Crystal Structure of the Lactose Repressor bound to anti-inducer ONPF in induced state · NPF A902 · binds SER69, LEU73, ALA75, PRO76, ILE79, ASN125, LEU148, ASP149 and 9 more
  • 1EFA · Crystal structure of the lac repressor dimer bound to operator and the anti-inducer onpf · NPF A901 · binds LEU73, HIS74, ALA75, PRO76, ILE79, ASN125, LEU148, ASP149 and 11 more
  • 1JWL · Structure of the dimeric lac REPRESSOR/OPERATOR O1/ONPF complex · NPF A334 · binds LEU73, ALA75, PRO76, ILE79, ASN125, LEU148, ASP149, PHE161 and 10 more
  • 2PAF · Crystal structure of the lactose repressor bound to anti-inducer onpf in induced state · NPF A902 · binds SER69, LEU73, ALA75, PRO76, ILE79, ASN125, LEU148, ASP149 and 9 more

Residues it binds most

LEU 16, ASN 16, ASP 16, PHE 16, SER 16, ALA 16, GLN 16, ILE 16, ARG 16, PRO 16 (residue and the binding sites it lines).

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