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Ligand · NMD

NMD · N-naphthalen-1-ylmethyl-2'-[3,5-dimethoxybenzamido]-2'-deoxy-adenosine

NMD, N-naphthalen-1-ylmethyl-2'-[3,5-dimethoxybenzamido]-2'-deoxy-adenosine (C30 H30 N6 O6, 570.6 g/mol), in the MolNFT structures on GenesisL1: bound in 2 records (1 PDB entry). Every binding site with its residues within 4.5 Å, the…

Component
NMD
Formula
C30 H30 N6 O6
Class
ligand
Structures
2
PDB entries
1

Binding sites

NMD in 2 structures; the first of them:

  • 1I32 · Leishmania mexicana glyceraldehyde-3-phosphate dehydrogenase in complex with inhibitors · NMD A361 · binds ASN8, GLY9, PHE10, GLY11, VAL37, ASP38, MET39, SER40 and 9 more
  • 1I32 · Leishmania mexicana glyceraldehyde-3-phosphate dehydrogenase in complex with inhibitors · NMD A361 · binds ASN8, GLY9, PHE10, GLY11, VAL37, ASP38, MET39, SER40 and 9 more

Residues it binds most

PHE 12, GLY 12, LEU 12, VAL 12, SER 12, ALA 12, ARG 12, ASN 12, ASP 12, GLN 12 (residue and the binding sites it lines).

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