Ligand · NK1

NK1 · (1R,5S,6S,7R,8S)-1-thioniabicyclo[4.3.0]nonan-5,7,8-triol

NK1, (1R,5S,6S,7R,8S)-1-thioniabicyclo[4.3.0]nonan-5,7,8-triol (C8 H15 O3 S +1, 191.3 g/mol), in the MolNFT structures on GenesisL1: bound in 2 records (1 PDB entry). Every binding site with its residues within 4.5 Å, the residues it binds…

Component: NK1
Formula: C8 H15 O3 S +1
Class: ligand
Structures: 2
PDB entries: 1

Binding sites

NK1 in 2 structures; the first of them:

2OW6 · Golgi alpha-mannosidase II complex with (1r,5s,6s,7r,8s)-1-thioniabicyclo[4.3.0]nonan-5,7… · NK1 A4001 · binds HIS90, ASP92, TRP95, ASP204, PHE206, ARG228, TYR269, ASP341 and 6 more
2OW6 · Golgi alpha-mannosidase II complex with (1R,5S,6S,7R,8S)-1… · NK1 A4001 · binds HIS90, ASP92, TRP95, ASP204, PHE206, ARG228, TYR269, ASP341 and 6 more

Residues it binds most

ASP 2, ARG 2, HIS 2, TRP 2, TYR 2, PHE 2, THR 2 (residue and the binding sites it lines).

Found with

ZN · Zinc ion
NAG · 2-acetamido-2-deoxy-beta-D-glucopyranose
PO4 · Phosphate ion
MRD · (4R)-2-methylpentane-2,4-diol

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