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Ligand · NII

NII · 2,7-bis[3-(dimethylamino)propyl]-4,9-bis[(3-hydroxypropyl)amino]benzo[lmn][3,8]phenanthroline-1,3,6,8(2H,7H)-tetrone

NII, 2,7-bis[3-(dimethylamino)propyl]-4,9-bis[(3-hydroxypropyl)amino]benzo[lmn][3,8]phenanthroline-1,3,6,8(2H,7H)-tetrone (C30 H42 N6 O6, 582.7 g/mol), in the MolNFT structures on GenesisL1: bound in 4 records (2 PDB entries). Every…

Component
NII
Formula
C30 H42 N6 O6
Class
ligand
Structures
4
PDB entries
2

Binding sites

NII in 4 structures; the first of them:

  • 3CCO · Structural adaptation and conservation in quadruplex-drug recognition · NII A1 · binds DG1005, DG1011
  • 3CDM · Structural adaptation and conservation in quadruplex-drug recognition · NII A26 · binds DG5, DG11, DG17, DG23
  • 3CCO · Structural adaptation and conservation in quadruplex-drug recognition · NII A1 · binds DG1005, DG1011
  • 3CDM · Structural adaptation and conservation in quadruplex-drug recognition · NII A26 · binds DG5, DG11, DG17, DG23

Residues it binds most

DG 14, DA 8, DT 8 (residue and the binding sites it lines).

Found with

  • K · Potassium ion
  • NA · Sodium ion

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