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Ligand · ND4

ND4 · Ammonium cation with D

ND4, Ammonium cation with D (N +1, 22.1 g/mol), in the MolNFT structures on GenesisL1: bound in 4 records (2 PDB entries). Every binding site with its residues within 4.5 Å, the residues it binds most and the ligands found with it.

Component
ND4
Formula
N +1
Class
ion
Structures
4
PDB entries
2

Binding sites

ND4 in 4 structures; the first of them:

  • 1L2K · Neutron Structure Determination of Sperm Whale Met-Myoglobin at 1.5A Resolution. · ND4 A818 · binds ALA84, PRO88
  • 2MB5 · Hydration in protein crystals. a neutron diffraction analysis of carbonmonoxymyoglobin · ND4 A178 · binds ASP122, PHE123, GLY124, ASP126, ALA127
  • 1L2K · Neutron structure determination of sperm whale met-myoglobin at 1.5A resolution. · ND4 A818 · binds ALA84, PRO88
  • 2MB5 · Hydration in protein crystals. a neutron diffraction analysis of carbonmonoxymyoglobin · ND4 A178 · binds ASP122, PHE123, GLY124, ASP126, ALA127

Residues it binds most

ASP 4, ALA 4, GLY 4, HIS 4, LYS 2, GLU 2, PHE 2, PRO 2, VAL 2 (residue and the binding sites it lines).

Found with

  • HEM · Protoporphyrin IX containing Fe
  • SO4 · Sulfate ion
  • CMO · Carbon monoxide

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