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Ligand · N8R

N8R · Dyclonine

N8R, Dyclonine (C18 H27 N O2, 289.4 g/mol), in the MolNFT structures on GenesisL1: bound in 2 records (1 PDB entry). Every binding site with its residues within 4.5 Å, the residues it binds most and the ligands found with it.

Component
N8R
Formula
C18 H27 N O2
Class
ligand
Structures
2
PDB entries
1

Binding sites

N8R in 2 structures; the first of them:

  • 7UGG · Cryo-EM structure of TRPV3 in complex with the anesthetic dyclonine · N8R A905 · binds PHE590, LEU591, TYR594, PHE633, THR636, LEU670, ILE659, VAL662 and 3 more
  • 7UGG · Cryo-EM structure of TRPV3 in complex with the anesthetic dyclonine · N8R A905 · binds PHE590, LEU591, TYR594, PHE633, THR636, LEU670, ILE659, ILE663 and 2 more

Residues it binds most

PHE 8, ILE 8, LEU 8, VAL 8, THR 8, TYR 8 (residue and the binding sites it lines).

Found with

  • POV · (2S)-3-(hexadecanoyloxy)-2-[(9Z)-octadec-9-enoyloxy]propyl 2-(trimethylammonio)ethyl phosphate
  • NA · Sodium ion

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