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Ligand · N8M

N8M · 5'-deoxy-5'-(dimethylamino)-8-methyladenosine

N8M, 5'-deoxy-5'-(dimethylamino)-8-methyladenosine (C13 H20 N6 O3, 308.3 g/mol), in the MolNFT structures on GenesisL1: bound in 2 records (1 PDB entry). Every binding site with its residues within 4.5 Å, the residues it binds most and the…

Component
N8M
Formula
C13 H20 N6 O3
Class
ligand
Structures
2
PDB entries
1

Binding sites

N8M in 2 structures; the first of them:

  • 3H0W · Human AdoMetDC with 5'-Deoxy-5'-[(N-dimethyl)amino]-8-methyl-adenosine · N8M A368 · binds HIS5, PHE7, SER66, GLU67, CYS82, PHE223, ASN224, PRO225 and 8 more
  • 3H0W · Human adometdc with 5'-deoxy-5'-[(N-DIMETHYL)AMINO]-8-methyl-adenosine · N8M A368 · binds HIS5, PHE7, SER66, GLU67, CYS82, PHE223, ASN224, PRO225 and 8 more

Residues it binds most

CYS 2, GLU 2, PHE 2, PRO 2, SER 2, ASN 2, GLY 2, HIS 2, ILE 2, THR 2 (residue and the binding sites it lines).

Found with

  • PUT · 1,4-diaminobutane
  • PYR · Pyruvic acid

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