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Ligand · N6L

N6L · D-phenylalanyl-N-(2,5-dichlorobenzyl)-L-prolinamide

N6L, D-phenylalanyl-N-(2,5-dichlorobenzyl)-L-prolinamide (C21 H23 Cl2 N3 O2, 420.3 g/mol), in the MolNFT structures on GenesisL1: bound in 2 records (1 PDB entry). Every binding site with its residues within 4.5 Å, the residues it binds…

Component
N6L
Formula
C21 H23 Cl2 N3 O2
Class
ligand
Structures
2
PDB entries
1

Binding sites

N6L in 2 structures; the first of them:

  • 4UDW · Thrombin in complex with 1-(2R)-2-amino-3-phenyl-propanoyl-N-(2… · N6L H1249 · binds HIS57, TYR60A, TRP60D, GLU97A, ASN98, LEU99, ILE174, ASP189 and 14 more
  • 4UDW · Thrombin in complex with 1-(2R)-2-amino-3-phenyl-propanoyl-N-(2… · N6L H1249 · binds HIS57, TYR60A, TRP60D, GLU97A, ASN98, LEU99, ILE174, ASP189 and 14 more

Residues it binds most

GLU 2, GLY 2, CYS 2, SER 2, TRP 2, TYR 2, ALA 2, ASN 2, ASP 2, HIS 2 (residue and the binding sites it lines).

Found with

  • NA · Sodium ion
  • NAG · 2-acetamido-2-deoxy-beta-D-glucopyranose
  • PO4 · Phosphate ion
  • GOL · Glycerol

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