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Ligand · N5Y

N5Y · N-(6-amino-1-benzyl-2,4-dioxo-1,2,3,4-tetrahydropyrimidin-5-yl)-N-methylbenzamide

N5Y, N-(6-amino-1-benzyl-2,4-dioxo-1,2,3,4-tetrahydropyrimidin-5-yl)-N-methylbenzamide (C19 H18 N4 O3, 350.4 g/mol), in the MolNFT structures on GenesisL1: bound in 2 records (1 PDB entry). Every binding site with its residues within 4.5…

Component
N5Y
Formula
C19 H18 N4 O3
Class
ligand
Structures
2
PDB entries
1

Binding sites

N5Y in 2 structures; the first of them:

  • 4ASY · Pseudomonas aeruginosa RmlA in complex with allosteric inhibitor · N5Y A1294 · binds TYR38, SER41, THR42, LEU45, TYR113, TYR114, GLY115, PHE118 and 9 more
  • 4ASY · Pseudomonas aeruginosa rmla in complex with allosteric inhibitor · N5Y A1294 · binds TYR38, SER41, THR42, LEU45, TYR113, TYR114, GLY115, PHE118 and 9 more

Residues it binds most

TYR 8, ARG 8, GLY 8, ALA 8, GLN 8, GLU 8, ILE 8, LEU 8, LYS 8, PHE 8 (residue and the binding sites it lines).

Found with

  • CL · Chloride ion
  • MES · 2-(N-morpholino)-ethanesulfonic acid

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