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Ligand · N5C

N5C · 5-nitrocytidine 5'-(tetrahydrogen triphosphate)

N5C, 5-nitrocytidine 5'-(tetrahydrogen triphosphate) (C9 H15 N4 O16 P3, 528.1 g/mol), in the MolNFT structures on GenesisL1: bound in 2 records (1 PDB entry). Every binding site with its residues within 4.5 Å, the residues it binds most…

Component
N5C
Formula
C9 H15 N4 O16 P3
Class
ligand
Structures
2
PDB entries
1

Binding sites

N5C in 2 structures; the first of them:

  • 3BSN · Norwalk Virus polymerase bound to 5-nitrocytidine triphosphate and primer-template RNA · N5C A514 · binds LYS166, GLU168, LYS174, ARG182, ASP242, TYR243, SER244, ARG245 and 9 more
  • 3BSN · Norwalk virus polymerase bound to 5-nitrocytidine triphosphate and primer-template RNA · N5C A514 · binds LYS166, GLU168, LYS174, ARG182, ASP242, TYR243, SER244, ARG245 and 9 more

Residues it binds most

ASP 2, LYS 2, ARG 2, G 2, SER 2, ASN 2, GLU 2, THR 2, TRP 2, TYR 2 (residue and the binding sites it lines).

Found with

  • MN · Manganese (II) ion
  • GOL · Glycerol

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