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Ligand · N3E

N3E · 1-[3-(4-carboxypiperidin-1-yl)-3-deoxy-beta-D-arabinofuranosyl]pyrimidine-2,4(1H,3H)-dione

N3E, 1-[3-(4-carboxypiperidin-1-yl)-3-deoxy-beta-D-arabinofuranosyl]pyrimidine-2,4(1H,3H)-dione (C15 H21 N3 O7, 355.3 g/mol), in the MolNFT structures on GenesisL1: bound in 2 records (1 PDB entry). Every binding site with its residues…

Component
N3E
Formula
C15 H21 N3 O7
Class
ligand
Structures
2
PDB entries
1

Binding sites

N3E in 2 structures; the first of them:

  • 2G8R · The crystal structure of the RNase A- 3-N-piperidine-4-carboxyl-3-deoxy-ara-uridine… · N3E A998 · binds ALA4, CYS65, ASN67, ASN71, ALA109, GLU111, VAL118, HIS119 and 1 more
  • 2G8R · The crystal structure of the RNase a- 3-N-piperidine-4- carboxyl-3-deoxy-ara-uridine… · N3E A998 · binds ALA4, CYS65, ASN67, ASN71, ALA109, GLU111, VAL118, HIS119 and 1 more

Residues it binds most

ASN 4, HIS 4, ALA 2, ASP 4, VAL 4, CYS 2, GLU 2, LYS 2, PHE 2, THR 2 (residue and the binding sites it lines).

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