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Ligand · N0D

N0D · 2,4-dimethylphenol

N0D, 2,4-dimethylphenol (C8 H10 O, 122.2 g/mol), in the MolNFT structures on GenesisL1: bound in 2 records (1 PDB entry). Every binding site with its residues within 4.5 Å, the residues it binds most and the ligands found with it.

Component
N0D
Formula
C8 H10 O
Class
ligand
Structures
2
PDB entries
1

Binding sites

N0D in 2 structures; the first of them:

  • 6ONR · Dehaloperoxidase B in complex with substrate 4-methyl-cresol · N0D A202 · binds PHE21, PHE35, HIS55, THR56, VAL59, PHE60, LEU100
  • 6ONR · Dehaloperoxidase B in complex with substrate 4-methyl-cresol · N0D A202 · binds PHE21, PHE35, HIS55, THR56, VAL59, PHE60, LEU100

Residues it binds most

PHE 4, HIS 4, THR 4, VAL 4, LEU 2 (residue and the binding sites it lines).

Found with

  • HEM · Protoporphyrin IX containing Fe
  • SO4 · Sulfate ion
  • EDO · 1,2-ethanediol
  • PEG · Di(hydroxyethyl)ether

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