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Ligand · N04

N04 · (2R)-2-[[3-[[3-[(Z)-(2,4-dioxo-1,3-thiazolidin-5-ylidene)methyl]phenoxy]methyl]phenyl]carbonylamino]pentanedioic acid

N04, (2R)-2-[[3-[[3-[(Z)-(2,4-dioxo-1,3-thiazolidin-5-ylidene)methyl]phenoxy]methyl]phenyl]carbonylamino]pentanedioic acid (C23 H20 N2 O8 S, 484.5 g/mol), in the MolNFT structures on GenesisL1: bound in 2 records (1 PDB entry). Every…

Component
N04
Formula
C23 H20 N2 O8 S
Class
ligand
Structures
2
PDB entries
1

Binding sites

N04 in 2 structures; the first of them:

  • 2Y66 · New 5-Benzylidenethiazolidine-4-one Inhibitors of Bacterial MurD Ligase: Design… · N04 A500 · binds ILE11, GLY12, LEU13, ASP35, THR36, ARG37, LEU57, SER71 and 13 more
  • 2Y66 · New 5-benzylidenethiazolidine-4-one inhibitors of bacterial murd ligase: design… · N04 A500 · binds ILE11, GLY12, LEU13, ASP35, THR36, ARG37, LEU57, SER71 and 13 more

Residues it binds most

LEU 2, ARG 2, GLY 2, ILE 2, PHE 2, SER 2, THR 2, ALA 2, ASN 2, ASP 2 (residue and the binding sites it lines).

Found with

  • CL · Chloride ion
  • SO3 · Sulfite ion
  • SO4 · Sulfate ion
  • DMS · Dimethyl sulfoxide

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