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Ligand · MVI

MVI · Mycinamicin VI

MVI, Mycinamicin VI (C35 H57 N O11, 667.8 g/mol), in the MolNFT structures on GenesisL1: bound in 3 records (3 PDB entries). Every binding site with its residues within 4.5 Å, the residues it binds most and the ligands found with it.

Component
MVI
Formula
C35 H57 N O11
Class
ligand
Structures
3
PDB entries
3

Binding sites

MVI in 3 structures; the first of them:

  • 3SSN · MycE Methyltransferase from the Mycinamycin Biosynthetic Pathway in Complex with Mg, SAH… · MVI A701 · binds PHE172, THR173, PRO174, LEU179, HIS180, TYR208, TRP213, ASP275 and 13 more
  • 4X7W · MycF mycinamicin III 3'-O-methyltransferase (E35Q, E139A variant) in complex with Mg, SAH… · MVI A303 · binds ALA30, GLY31, TYR49, MET56, ARG61, PHE118, MET132, LEU134 and 11 more
  • 4X81 · MycF mycinamicin III 3'-O-methyltransferase (E35Q, M56A, E139A variant) in complex with… · MVI A305 · binds ALA30, GLY31, LEU32, TYR49, ARG61, PHE118, MET132, LEU134 and 10 more

Residues it binds most

ASP 6, LEU 6, ILE 6, TYR 6, ALA 6, GLN 6, GLY 6, MET 4, PHE 6, PRO 6 (residue and the binding sites it lines).

Found with

  • SAH · S-adenosyl-L-homocysteine
  • MG · Magnesium ion
  • DMS · Dimethyl sulfoxide
  • GOL · Glycerol

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