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Ligand · MSN

MSN · (1R,2R,3R,4S,5R)-4-amino-5-(methylthio)cyclopentane-1,2,3-triol

MSN, (1R,2R,3R,4S,5R)-4-amino-5-(methylthio)cyclopentane-1,2,3-triol (C6 H13 N O3 S, 179.2 g/mol), in the MolNFT structures on GenesisL1: bound in 4 records (2 PDB entries). Every binding site with its residues within 4.5 Å, the residues…

Component
MSN
Formula
C6 H13 N O3 S
Class
ligand
Structures
4
PDB entries
2

Binding sites

MSN in 4 structures; the first of them:

  • 2F7O · Golgi alpha-mannosidase II complex with mannostatin A · MSN A5002 · binds HIS90, ASP92, TRP95, ASP204, PHE206, ARG228, TYR269, ASP341 and 5 more
  • 3DX0 · Golgi alpha-Mannosidase II in complex with Mannostatin A at pH 5.75 · MSN A1049 · binds HIS90, ASP92, TRP95, ASP204, PHE206, ARG228, TYR269, ASP341 and 6 more
  • 2F7O · Golgi alpha-mannosidase II complex with mannostatin a · MSN A5002 · binds HIS90, ASP92, TRP95, ASP204, PHE206, ARG228, TYR269, ASP341 and 5 more
  • 3DX0 · Golgi alpha-mannosidase II in complex with mannostatin a at pH 5.75 · MSN A1049 · binds HIS90, ASP92, TRP95, ASP204, PHE206, ARG228, TYR269, ASP341 and 6 more

Residues it binds most

ASP 4, ARG 4, HIS 4, TYR 4, TRP 4, PHE 4, THR 4 (residue and the binding sites it lines).

Found with

  • ZN · Zinc ion
  • NAG · 2-acetamido-2-deoxy-beta-D-glucopyranose
  • MPD · (4S)-2-methyl-2,4-pentanediol
  • PO4 · Phosphate ion
  • SO4 · Sulfate ion

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