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Ligand · MSM

MSM · (methylsulfanyl)methane

MSM, (methylsulfanyl)methane (C2 H6 S, 62.1 g/mol), in the MolNFT structures on GenesisL1: bound in 3 records (2 PDB entries). Every binding site with its residues within 4.5 Å, the residues it binds most and the ligands found with it.

Component
MSM
Formula
C2 H6 S
Class
ligand
Structures
3
PDB entries
2

Binding sites

MSM in 3 structures; the first of them:

  • 1ZDQ · Crystal Structure of Met150Gly AfNiR with Methylsulfanyl Methane Bound · MSM A1507 · binds HIS60, ALA61, MET62, LEU93, HIS95, TRP144, HIS145, SER148 and 1 more
  • 7PCN · BurG (holo) in complex with gonyenediol (14), trigonic acid (6) and DMS: Biosynthesis of… · MSM A804 · binds TYR133, GLN194, GLU232, MET236
  • 7PCN · Burg (holo) in complex with gonyenediol (14), trigonic acid (6) and dms: biosynthesis of… · MSM A804 · binds TYR133, GLN194, GLU232, MET236

Residues it binds most

HIS 3, MET 7, GLU 6, GLN 4, TYR 4, ALA 3, LEU 3, PRO 3, SER 3, TRP 3 (residue and the binding sites it lines).

Found with

  • 78I · (2R)-2-oxidanyl-2-(1-oxidanylcyclopropyl)ethanoic acid
  • 7BI · dimethyl-[(Z)-3,4,5-tris(oxidanyl)-5-oxidanylidene-pent-3-enyl]sulfanium
  • NAI · 1,4-dihydronicotinamide adenine dinucleotide
  • MG · Magnesium ion
  • CU · Copper (II) ion

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