Ligand · MQD

MQD · 2-methylpentane-1,2,4-triol

MQD, 2-methylpentane-1,2,4-triol (C6 H14 O3, 134.2 g/mol), in the MolNFT structures on GenesisL1: bound in 2 records (1 PDB entry). Every binding site with its residues within 4.5 Å, the residues it binds most and the ligands found with it.

Component: MQD
Formula: C6 H14 O3
Class: ligand
Structures: 2
PDB entries: 1

Binding sites

MQD in 2 structures; the first of them:

1OAD · Glucose isomerase from Streptomyces rubiginosus in P21212 crystal form · MQD A395 · binds TRP16, HIS54, THR90, PHE94, VAL135, TRP137, GLU181, GLU217 and 3 more
1OAD · Glucose isomerase from streptomyces rubiginosus in P21212 crystal form · MQD A395 · binds TRP16, HIS54, THR90, PHE94, VAL135, TRP137, GLU181, GLU217 and 3 more

Residues it binds most

GLU 4, HIS 4, PHE 4, TRP 4, ASP 4, THR 4, VAL 4 (residue and the binding sites it lines).

Found with

MG · Magnesium ion
MN · Manganese (II) ion
MPD · (4S)-2-methyl-2,4-pentanediol
MRD · (4R)-2-methylpentane-2,4-diol
TRS · 2-amino-2-hydroxymethyl-propane-1,3-diol

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