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Ligand · MF6

MF6 · (1S,3R,4R,6R,9S,11R,14R,15S,16R,18R)-4-(6-amino-9H-purin-9-yl)-9,11,15,16,18-pentahydroxy-2,5,8,10,12,17-hexaoxa-9lambda~5~,11lambda~5~-diphosphatricyclo[12.2.1.1~3,6~]octadecane-9,11-dione

MF6, (1S,3R,4R,6R,9S,11R,14R,15S,16R,18R)-4-(6-amino-9H-purin-9-yl)-9,11,15,16,18-pentahydroxy-2,5,8,10,12,17-hexaoxa-9lambda~5~,11lambda~5~-diphosphatricyclo[12.2.1.1~3,6~]octadecane-9,11-dione (C15 H21 N5 O13 P2, 541.3 g/mol), in the…

Component
MF6
Formula
C15 H21 N5 O13 P2
Class
ligand
Structures
3
PDB entries
3

Binding sites

MF6 in 3 structures; the first of them:

  • 7UAW · Structure of Clostridium botulinum prophage Tad1 in complex with 1''-2' gcADPR · MF6 A201 · binds PRO24, GLY25, HIS29, GLN53, LYS54, GLY55, ALA56, ARG57 and 14 more
  • 8KBJ · Structure of HgmTad2 complexed with 1',2'-cADPR · MF6 A201 · binds TRP21, ASN22, GLY23, MSE26, MSE76, TRP87, LEU88, SER90 and 13 more
  • 8KBK · Structure of AcrIIA7 complexed with 1',2'-cADPR and cGG · MF6 A201 · binds TRP21, ASN22, GLY23, MSE26, MSE76, TRP87, LEU88, ALA89 and 14 more

Residues it binds most

TRP 5, MSE 5, GLY 7, LEU 7, ASN 7, ARG 2, ASP 5, SER 5, THR 7, ALA 4 (residue and the binding sites it lines).

Found with

  • C2E · 9,9'-[(2r,3r,3as,5s,7ar,9r,10r,10as,12s,14ar)-3,5,10, 12-tetrahydroxy-5,12-dioxidooctahydro-2H,7H-difuro[3, 2-D:3',2'-J][1,3,7,9,2, 8]tetraoxadiphosphacyclododecine-2,9-diyl]bis(2-amino-1,9-dihydro-6H-purin-6-one)

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