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Ligand · MD3

MD3 · N-(carboxycarbonyl)-S-(naphthalen-2-ylmethyl)-L-cysteine

MD3, N-(carboxycarbonyl)-S-(naphthalen-2-ylmethyl)-L-cysteine (C16 H15 N O5 S, 333.4 g/mol), in the MolNFT structures on GenesisL1: bound in 2 records (1 PDB entry). Every binding site with its residues within 4.5 Å, the residues it binds…

Component
MD3
Formula
C16 H15 N O5 S
Class
ligand
Structures
2
PDB entries
1

Binding sites

MD3 in 2 structures; the first of them:

  • 3T4V · Crystal Structure of AlkB in complex with Fe(III) and… · MD3 A401 · binds LEU118, ASN120, TYR122, LEU128, HIS131, ASP133, ILE143, SER145 and 11 more
  • 3T4V · Crystal structure of alkb in complex with FE(III) and N-oxalyl-S-(2… · MD3 A401 · binds LEU118, ASN120, TYR122, LEU128, HIS131, ASP133, ILE143, SER145 and 11 more

Residues it binds most

ARG 2, LEU 2, ASN 2, HIS 2, ILE 2, SER 2, ASP 2, PHE 2, THR 2, TRP 2 (residue and the binding sites it lines).

Found with

  • FE · Fe (III) ion
  • GOL · Glycerol

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