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Ligand · M6H

M6H · 2-(phenylmethyl)imidazolidine

M6H, 2-(phenylmethyl)imidazolidine (C10 H14 N2, 162.2 g/mol), in the MolNFT structures on GenesisL1: bound in 3 records (2 PDB entries). Every binding site with its residues within 4.5 Å, the residues it binds most and the ligands found…

Component
M6H
Formula
C10 H14 N2
Class
ligand
Structures
3
PDB entries
2

Binding sites

M6H in 3 structures; the first of them:

  • 7Q2B · mycolic acid methyltransferase Hma (MmaA4) from Mycobac-terium tuberculosis in complex… · M6H A401 · binds TYR42, GLU146, GLU149, HIS150, ILE204, VAL205, PHE209, GLY212 and 3 more
  • 6T05 · Crystal structure of YTHDC1 with fragment 18 (DHU_DC1_048) · M6H B605 · binds ASN367, TRP377, SER378, THR379, LEU380, TRP428, MET434, MET438 and 1 more
  • 7Q2B · Mycolic acid methyltransferase hma (MMAA4) from mycobac-terium tuberculosis in complex… · M6H A401 · binds TYR42, GLU146, GLU149, HIS150, PHE209, LEU214, TYR241

Residues it binds most

GLU 3, TYR 2, HIS 3, LEU 3, TRP 2, MET 1, PHE 2, ASN 1, GLY 1, ILE 1 (residue and the binding sites it lines).

Found with

  • MG · Magnesium ion
  • DMS · Dimethyl sulfoxide
  • SO4 · Sulfate ion

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