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Ligand · M4Q

M4Q · 6-[[methyl(thiophen-3-ylmethyl)amino]methyl]-5~{H}-pyrimidine-2,4-dione

M4Q, 6-[[methyl(thiophen-3-ylmethyl)amino]methyl]-5~{H}-pyrimidine-2,4-dione (C11 H13 N3 O2 S, 251.3 g/mol), in the MolNFT structures on GenesisL1: bound in 2 records (1 PDB entry). Every binding site with its residues within 4.5 Å, the…

Component
M4Q
Formula
C11 H13 N3 O2 S
Class
ligand
Structures
2
PDB entries
1

Binding sites

M4Q in 2 structures; the first of them:

  • 6SZT · Crystal structure of YTHDC1 with fragment 10 (DHU_DC1_076) · M4Q A601 · binds LYS361, SER362, ASN363, ASN367, TRP377, SER378, THR379, LEU380 and 7 more
  • 6SZT · Crystal structure of YTHDC1 with fragment 10 (DHU_DC1_076) · M4Q A601 · binds LYS361, SER362, ASN363, ASN367, TRP377, SER378, THR379, LEU380 and 7 more

Residues it binds most

LEU 4, ASN 4, SER 4, TRP 4, ARG 4, ASP 4, LYS 4, MET 4, PRO 4, THR 4 (residue and the binding sites it lines).

Found with

  • SO4 · Sulfate ion

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