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Ligand · M4B

M4B · 6-methyl-5-nitro-4-phenyl-1~{H}-pyrimidin-2-one

M4B, 6-methyl-5-nitro-4-phenyl-1~{H}-pyrimidin-2-one (C11 H9 N3 O3, 231.2 g/mol), in the MolNFT structures on GenesisL1: bound in 1 record (1 PDB entry). Every binding site with its residues within 4.5 Å, the residues it binds most and the…

Component
M4B
Formula
C11 H9 N3 O3
Class
ligand
Structures
1
PDB entries
1

Binding sites

M4B in 1 structure; the first of them:

  • 6T01 · Crystal structure of YTHDC1 with fragment 13 (DHU_DC1_153) · M4B A601 · binds ASN367, TRP377, SER378, THR379, LEU380, TRP428, VAL429, LEU430 and 4 more

Residues it binds most

LEU 2, TRP 2, MET 2, SER 2, ASN 2, ASP 2, PRO 2, THR 2, VAL 2 (residue and the binding sites it lines).

Found with

  • SO4 · Sulfate ion

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