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Ligand · M1A

M1A · 6-amino-1-methylpurine

M1A, 6-amino-1-methylpurine (C6 H8 N5 +1, 150.2 g/mol), in the MolNFT structures on GenesisL1: bound in 4 records (2 PDB entries). Every binding site with its residues within 4.5 Å, the residues it binds most and the ligands found with it.

Component
M1A
Formula
C6 H8 N5 +1
Class
ligand
Structures
4
PDB entries
2

Binding sites

M1A in 4 structures; the first of them:

  • 1B42 · Vaccinia methyltransferase VP39 complexed with M1ADE and S-adenosylhomocysteine · M1A A600 · binds TYR22, PHE180, ASP182, TYR204, ALA206, GLU233
  • 7A1V · Crystal structure of YTHDF2 in complex with m1A · M1A A701 · binds LYS416, SER417, TYR418, SER419, ASP422, TRP432, CYS433, SER434 and 4 more
  • 1B42 · Vaccinia methyltransferase VP39 complexed with M1ADE and S- adenosylhomocysteine · M1A A600 · binds TYR22, PHE180, ASP182, TYR204, ALA206, GLU233
  • 7A1V · Crystal structure of YTHDF2 in complex with M1A · M1A A701 · binds LYS416, SER417, TYR418, SER419, ASP422, TRP432, CYS433, SER434 and 2 more

Residues it binds most

SER 2, ASP 4, TYR 4, TRP 2, ALA 2, CYS 2, GLU 2, LYS 2, PHE 2 (residue and the binding sites it lines).

Found with

  • SAH · S-adenosyl-L-homocysteine
  • SO4 · Sulfate ion
  • GOL · Glycerol

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