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Ligand · LYO

LYO · 4-hydroxy-lysine

LYO, 4-hydroxy-lysine (C6 H14 N2 O3, 162.2 g/mol), in the MolNFT structures on GenesisL1: bound in 2 records (1 PDB entry). Every binding site with its residues within 4.5 Å, the residues it binds most and the ligands found with it.

Component
LYO
Formula
C6 H14 N2 O3
Class
ligand
Structures
2
PDB entries
1

Binding sites

LYO in 2 structures; the first of them:

  • 6EXH · Crystal structure of the complex Fe(II)/alpha-ketoglutarate dependent dioxygenase KDO5… · LYO A402 · binds TRP112, GLN144, ARG145, MET160, THR165, GLY166, SER167, HIS176 and 3 more
  • 6EXH · Crystal structure of the complex FE(II)/ALPHA-ketoglutarate dependent dioxygenase KDO5… · LYO A402 · binds TRP112, GLN144, ARG145, MET160, THR165, GLY166, SER167, HIS176 and 3 more

Residues it binds most

ARG 8, GLN 8, GLU 8, ASP 8, GLY 8, HIS 8, THR 8, LEU 6, SER 6, ASN 4 (residue and the binding sites it lines).

Found with

  • FE · Fe (III) ion
  • GOL · Glycerol
  • SIN · Succinic acid

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