Ligand · LYN

LYN · 2,6-diamino-hexanoic acid amide

LYN, 2,6-diamino-hexanoic acid amide (C6 H16 N3 O +1, 146.2 g/mol), in the MolNFT structures on GenesisL1: bound in 7 records (4 PDB entries). Every binding site with its residues within 4.5 Å, the residues it binds most and the ligands…

Component: LYN
Formula: C6 H16 N3 O +1
Class: ligand
Structures: 7
PDB entries: 4

Binding sites

LYN in 7 structures; the first of them:

3A74 · Lysyl-tRNA synthetase from Bacillus stearothermophilus complexed with Diadenosine… · LYN A495 · binds GLY207, ALA208, ILE228, ALA229, GLU231, ARG253, MET267, GLU269 and 8 more
4LTE · Structure of Cysteine-free Human Insulin Degrading Enzyme in Complex with Macrocyclic… · LYN M101 · binds ALA198, TRP199, PHE202, PHE1, DFF2
4V36 · The structure of L-PGS from Bacillus licheniformis · LYN A1851 · binds TRP687, LEU688, LYS691, LYS692, GLU693, LYS694, LEU698, GLY699 and 5 more
3A74 · Lysyl-tRNA synthetase from bacillus stearothermophilus complexed with diadenosine… · LYN A495 · binds GLY207, ALA208, ILE228, ALA229, GLU231, ARG253, MET267, GLU269 and 8 more
4LTE · Structure of cysteine-free human insulin degrading enzyme in complex with macrocyclic… · LYN M3 · binds ALA198, TRP199, PHE202, PHE1, DFF2
4V36 · The structure of L-pgs from bacillus licheniformis · LYN A1851 · binds TRP687, LEU688, LYS691, LYS692, GLU693, LYS694, LEU698, GLY699 and 5 more
5W0J · Antiparallel coiled coil hexamer formed by de novo peptides (acc- HEX2). · LYN A101 · binds GLN26, ALA27, ILE28, GLU29

Residues it binds most

ALA 14, GLU 12, GLY 10, PHE 12, LEU 10, ARG 10, ILE 10, MET 10, ASN 8, TYR 8 (residue and the binding sites it lines).

Found with

B4P · Bis(adenosine)-5'-tetraphosphate
FUM · Fumaric acid
MG · Magnesium ion
ZN · Zinc ion
EPE · 4-(2-hydroxyethyl)-1-piperazine ethanesulfonic acid
TRS · 2-amino-2-hydroxymethyl-propane-1,3-diol
ACE · Acetyl group
CL · Chloride ion

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